Two sample MR report


genus.Intestinibacter.id.11345 against VP1

Date: 20 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 15 0.1784924 0.2160961 0.4237120
Weighted median 15 0.1394284 0.0908676 0.1249284
Inverse variance weighted 15 0.1599172 0.0655508 0.0147038
Simple mode 15 0.1694272 0.1583204 0.3026538
Weighted mode 15 0.1648886 0.1605717 0.3218912

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 7.837717 13 0.8540096
Inverse variance weighted 7.845854 14 0.8972010

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0015519 0.0172038 0.9294966

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
4.82e-05 6e-07 TRUE 0.6678481

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8