Two sample MR report


Beta-hydroxyisovalerate levels against Malignant_melanoma_of_skin

Date: 03 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 5 -0.3621300 0.1811637 0.1394732
Weighted median 5 -0.1976936 0.0862826 0.0219499
Inverse variance weighted 5 -0.1517443 0.0685220 0.0267921
Simple mode 5 -0.2100509 0.1024645 0.1096920
Weighted mode 5 -0.2084356 0.0963964 0.0966424

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 2.685857 3 0.4426361
Inverse variance weighted 4.244624 4 0.3739108

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0393574 0.0315236 0.3004048

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0002681 0 TRUE 0.1553167

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8