Two sample MR report


EBI-a-GCST006909 against PRKAB1-UKBPPP

Date: 08 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 34 0.007 0.023 0.752
Weighted median 34 0.002 0.015 0.907
Inverse variance weighted 34 0.002 0.011 0.883
Simple mode 34 -0.008 0.030 0.801
Weighted mode 34 -0.002 0.028 0.938

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 35.2 32 0.319
Inverse variance weighted 35.3 33 0.360

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.001 0.005 0.778

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0 0 TRUE 0.866

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8