Two sample MR report


ATF7IP2_Epithelial against bbj-a-88

Date: 13 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 7 0.1489104 0.3013925 0.6421915
Weighted median 7 0.0486284 0.0246546 0.0485653
Inverse variance weighted 7 0.0463299 0.0202092 0.0218758
Simple mode 7 0.0469057 0.0338208 0.2148035
Weighted mode 7 0.0421306 0.0277279 0.1794612

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 1.644860 5 0.8957719
Inverse variance weighted 1.761225 6 0.9402974

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0448356 0.1314353 0.7468786

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
8.1e-05 0 TRUE 0.3926761

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8