Two sample MR report


PLD1_Macrophages against UKB-b-18436

Date: 13 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 6 -0.0420583 0.1592720 0.8047760
Weighted median 6 -0.0399783 0.0113447 0.0004252
Inverse variance weighted 6 -0.0388800 0.0097572 0.0000675
Simple mode 6 -0.0430125 0.0153362 0.0377866
Weighted mode 6 -0.0427417 0.0155849 0.0406706

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 0.2956524 4 0.9900931
Inverse variance weighted 0.2960521 5 0.9977167

Test for directional horizontal pleiotropy

egger_intercept se pval
0.0021831 0.1091939 0.9850067

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
5.55e-05 0 TRUE 0.482073

Note - R^2 values are approximate


Forest plot of single SNP MR

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Comparison of results using different MR methods

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Funnel plot

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Leave-one-out sensitivity analysis

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