Two sample MR report


SPATC1L_Macrophages against UKB-b-18436

Date: 13 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 3 0.0224432 0.0723413 0.8084888
Weighted median 3 -0.0416752 0.0152850 0.0064003
Inverse variance weighted 3 -0.0348639 0.0123003 0.0045912
Simple mode 3 -0.0446727 0.0186572 0.1389699
Weighted mode 3 -0.0446727 0.0205298 0.1615241

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 0.7755381 1 0.3785092
Inverse variance weighted 1.4217656 2 0.4912104

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0424207 0.0527698 0.5689422

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
2.61e-05 0 TRUE 0.6309711

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8