Two sample MR report


ENSG00000100985 || id:eqtl-a-ENSG00000100985 against Liver cell carcinoma || id:ieu-b-4953

Date: 23 February, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 13 0 0 0.734
Weighted median 13 0 0 0.888
Inverse variance weighted 13 0 0 0.436
Simple mode 13 0 0 0.261
Weighted mode 13 0 0 0.867

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 13.5 11 0.264
Inverse variance weighted 14.6 12 0.265

Test for directional horizontal pleiotropy

egger_intercept se pval
0 0 0.362

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0 0 TRUE 0.008

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8