Two sample MR report


Tumor necrosis factor receptor superfamily member 9 levels against gastric_cancer

Date: 02 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 39 0.0457055 0.1395036 0.7450385
Weighted median 39 -0.0701541 0.0666372 0.2924431
Inverse variance weighted 39 -0.1537667 0.0501266 0.0021581
Simple mode 39 -0.1679610 0.1086674 0.1304794
Weighted mode 39 -0.1148239 0.0681198 0.1000657

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 44.06556 37 0.1974796
Inverse variance weighted 46.84750 38 0.1537397

Test for directional horizontal pleiotropy

egger_intercept se pval
-0.0219492 0.0143613 0.1349286

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
0.0002146 0 TRUE 0.1359871

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8